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Genomes encoding eukaryotic-like proteins

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PF03133 Tubulin-tyrosine ligase family

Copy number in non-pathogens:
Mean=0.01 Stddev=0.09

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Legionella longbeachae NSW150 s 10 1
Legionella hackeliae s 10 1
Tatlockia micdadei s 10 1
Desmospora sp. 8437 s 10 1
Brevibacillus sp. CF112 s 10 1
Fluoribacter dumoffii Tex-KL s 10 1
Paenibacillus vortex V453 s 10 1
Legionella drancourtii LLAP12 s 10 1
Paenibacillus riograndensis SBR5 s 10 1
Legionella lansingensis DSM 19556 = ATCC 49751 s 10 1
Legionella wadsworthii DSM 21896 = ATCC 33877 s 10 1
Legionella longbeachae D-4968 s 10 1
Tatlockia micdadei s 10 1
Burkholderia ubonensis s 10 1
Fluoribacter bozemanae s 10 1
Tatlockia micdadei s 10 1
Faecalibaculum rodentium s 10 1
Legionella birminghamensis s 10 1
Fluoribacter bozemanae s 10 1
Legionella cincinnatiensis s 10 1
Legionella hackeliae s 10 1
Tatlockia micdadei s 10 1
Legionella tucsonensis s 10 1
Paenibacillus glucanolyticus s 10 1
Paenibacillus glucanolyticus s 10 1
Flavobacteriaceae bacterium UJ101 s 10 1
Legionella longbeachae s 10 1
Paenibacillus glucanolyticus s 10 1
Faecalibaculum rodentium s 10 1
Legionella longbeachae s 10 1
Tatlockia micdadei s 10 1
Tatlockia micdadei s 10 1

*p=pathogen;s=symbiont

Release announcements

News

  • EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31

    20.08.17
  • EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29

    24.06.16
  • New release 5.0 of Eukaryotic-like domains finished

    16.09.15
    F-Box domain

Latest publications

  • EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
  • Prediction of microbial phenotypes based on comparative genomics.

Contact

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  • +43 1 4277 876681
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